dc.contributor.author | Holand, Anna Marie | |
dc.contributor.author | Steinsland, Ingelin | |
dc.contributor.author | Martino, Sara | |
dc.contributor.author | Jensen, Henrik | |
dc.date.accessioned | 2017-10-30T13:32:31Z | |
dc.date.available | 2017-10-30T13:32:31Z | |
dc.date.created | 2013-09-25T20:41:59Z | |
dc.date.issued | 2013 | |
dc.identifier.citation | G3: Genes, Genomes, Genetics. 2013, 3 (8), 1241-1251. | nb_NO |
dc.identifier.issn | 2160-1836 | |
dc.identifier.uri | http://hdl.handle.net/11250/2462919 | |
dc.description.abstract | Animal models are generalized linear mixed models used in evolutionary biology and animal breeding to identify the genetic part of traits. Integrated Nested Laplace Approximation (INLA) is a methodology for making fast, nonsampling-based Bayesian inference for hierarchical Gaussian Markov models. In this article, we demonstrate that the INLA methodology can be used for many versions of Bayesian animal models. We analyze animal models for both synthetic case studies and house sparrow (Passer domesticus) population case studies with Gaussian, binomial, and Poisson likelihoods using INLA. Inference results are compared with results using Markov Chain Monte Carlo methods. For model choice we use difference in deviance information criteria (DIC). We suggest and show how to evaluate differences in DIC by comparing them with sampling results from simulation studies. We also introduce an R package, AnimalINLA, for easy and fast inference for Bayesian Animal models using INLA. © 2013 Holand et al. | nb_NO |
dc.language.iso | eng | nb_NO |
dc.publisher | Genetics Society of America: G3 | nb_NO |
dc.rights | Navngivelse 4.0 Internasjonal | * |
dc.rights.uri | http://creativecommons.org/licenses/by/4.0/deed.no | * |
dc.title | Animal Models and Integrated Nested Laplace Approximations | nb_NO |
dc.type | Journal article | nb_NO |
dc.type | Peer reviewed | nb_NO |
dc.description.version | publishedVersion | nb_NO |
dc.source.pagenumber | 1241-1251 | nb_NO |
dc.source.volume | 3 | nb_NO |
dc.source.journal | G3: Genes, Genomes, Genetics | nb_NO |
dc.source.issue | 8 | nb_NO |
dc.identifier.doi | 10.1534/g3.113.006700 | |
dc.identifier.cristin | 1052334 | |
dc.relation.project | Norges forskningsråd: 221956 | nb_NO |
dc.relation.project | Norges forskningsråd: 223257 | nb_NO |
dc.description.localcode | Copyright © 2013 Holand et al. This is an open-access article distributed under the terms of the Creative Commons Attribution Unported License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. | nb_NO |
cristin.unitcode | 194,66,10,0 | |
cristin.unitcode | 194,63,15,0 | |
cristin.unitname | Institutt for biologi | |
cristin.unitname | Institutt for matematiske fag | |
cristin.ispublished | true | |
cristin.fulltext | original | |
cristin.qualitycode | 1 | |