Shortreads (SR) analysis pipeline and correlation between SR and microRNA (miRNA) expression.

Fadeev, Fedor
Master thesis
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URI
http://hdl.handle.net/11250/2422957
Date
2016
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Abstract
MicroRNA are small non-coding RNA molecules that execute post-transcriptional regulation of gene expression for over half of human and mammalian genes.

This report investigates shortreads (11-15 nucleotides) that align to start or end of mi- croRNAs. Their expression and correlation to miRNA grouped by length of half-lives. An attempt was made to implement a processing pipeline for this type of analysis - Shores . Shores is described and discussed in the report and is used for all the analysis on shortreads.
Publisher
NTNU