Browsing Publikasjoner fra CRIStin - NTNU by Journals "NAR Genomics and Bioinformatics"

Now showing items 1-2 of 2

    • Rapid discovery of novel prophages using biological feature engineering and machine learning 

      Sirén, Kimmo; Millard, Andrew; Petersen, Bent; Gilbert, Marcus Thomas Pius; Clokie, Martha R.J.; Sicheritz-Pontén, Thomas (Peer reviewed; Journal article, 2021)
      Prophages are phages that are integrated into bacterial genomes and which are key to understanding many aspects of bacterial biology. Their extreme diversity means they are challenging to detect using sequence similarity, ...

    • TiSA: TimeSeriesAnalysis - A pipeline for the analysis of longitudinal transcriptomics data 

      Lefol, Yohan Pierre; Korfage, Tom; Mjelle, Robin; Prebensen, Christian Haugland; Lüders, Torben; Müller, Bruno; Krokan, Hans Einar; Sarno, Antonio; Alsøe, Lene; Berdal, Jan-Erik; Sætrom, Pål; Nilsen, Hilde; Domanska, Diana (Peer reviewed; Journal article, 2023)
      Improved transcriptomic sequencing technologies now make it possible to perform longitudinal experiments, thus generating a large amount of data. Currently, there are no dedicated or comprehensive methods for the analysis ...