Blar i Institutt for naturhistorie på tidsskrift "Nature"

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    • Dense sampling of bird diversity increases power of comparative genomics 

      Feng, Shaohong; Stiller, Josefin; Deng, Yuan; Armstrong, Joel; Fang, Qi; Reeve, Andrew Hart; Xie, Duo; Chen, Guangji; Guo, Chunxue; Faircloth, Brant C.; Petersen, Bent; Wang, Zongji; Zhou, Qi; Diekhans, Mark; Chen, Wanjun; Andreu-Sánchez, Sergio; Margaryan, Ashot; Howard, Jason Travis; Parent, Carole; Pacheco, George; Sinding, Mikkel-Holger S.; Puetz, Lara; Cavill, Emily; Gilbert, Marcus Thomas Pius (Peer reviewed; Journal article, 2020)
      Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity1,2,3,4. Sparse taxon sampling has previously been proposed to confound phylogenetic inference5, and captures ...

    • Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny 

      Cappellini, Enrico; Welker, Frido; Pandolfi, Luca; Ramos-Madrigal, Jazmín; Samodova, Diana; Rüther, Patrick L.; Fotakis, Anna K.; Lyon, David; Moreno-Mayar, J. Víctor; Bukhsianidze, Maia; Jersie-Christensen, Rosa Rakownikow; Mackie, Meaghan; Ginolhac, Aurélien; Ferring, Reid; Tappen, Martha; Palkopoulou, Eleftheria; Dickinson, Marc R.; Stafford, Jr., Thomas W.; Chan, Yvonne L.; Götherström, Anders; Nathan, Senthilvel K.S.S.; Heintzman, Peter D.; Kapp, Joshua D.; Kirillova, Irina V.; Moodley, Yoshan; Agusti, Jordi; Kahlke, Ralf-Dietrich; Kiladze, Gocha; Martínez-Navarro, Bienvenido; Liu, Shanlin; Sandoval Velasco, Marcela; Sinding, Mikkel-Holger S.; Kelstrup, Christian D.; Allentoft, Morten E.; Orlando, Ludovic; Penkman, Kirsty; Shapiro, Beth; Rook, Lorenzo; Dalén, Love; Gilbert, Marcus Thomas Pius; Olsen, Jesper V.; Lordkipanidze, David; Willerslev, Eske (Journal article; Peer reviewed, 2019)
      The sequencing of ancient DNA has enabled the reconstruction of speciation, migration and admixture events for extinct taxa1. However, the irreversible post-mortem degradation2 of ancient DNA has so far limited its ...

    • Evolution of the germline mutation rate across vertebrates 

      Bergeron, Lucie A.; Besenbacher, Søren; Zheng, Jiao; Li, Panyi; Bertelsen, Mads Frost; Quintard, Benoit; Hoffman, Joseph I.; Li, Zhipeng; St. Leger, Judy; Shao, Changwei; Stiller, Josefin; Gilbert, Marcus Thomas Pius; Schierup, Mikkel H.; Zhang, Guojie (Peer reviewed; Journal article, 2023)
      The germline mutation rate determines the pace of genome evolution and is an evolving parameter itself1. However, little is known about what determines its evolution, as most studies of mutation rates have focused on single ...

    • Grey wolf genomic history reveals a dual ancestry of dogs 

      Bergström, Anders; Stanton, David W. G.; Taron, Ulrike H.; Frantz, Laurent; Sinding, Mikkel Holger Strander; Ersmark, Erik; Pfrengle, Saskia; Cassatt-Johnstone, Molly; Lebrasseur, Ophélie; Girdland-Flink, Linus; Fernandes, Daniel M.; Ollivier, Morgane; Speidel, Leo; Gopalakrishnan, Shyam; Westbury, Michael V.; Ramos-Madrigal, Jazmin; Feuerborn, Tatiana R.; Reiter, Ella; Gretzinger, Joscha; Münzel, Susanne C.; Swali, Pooja; Conard, Nicholas J.; Carøe, Christian; Haile, James; Linderholm, Anna; Androsov, Semyon; Barnes, Ian; Baumann, Chris; Benecke, Norbert; Bocherens, Hervé; Brace, Selina; Carden, Ruth F.; Drucker, Dorothée G.; Fedorov, Sergey; Gasparik, Mihály; Germonpré, Mietje; Grigoriev, Semyon; Groves, Pam; Hertwig, Stefan T.; Ivanova, Varvara V.; Janssens, Luc; Jennings, Richard P.; Kasparov, Aleksei K.; Kirillova, Irina V.; Kurmaniyazov, Islam; Kuzmin, Yaroslav V.; Kosintsev, Pavel A.; Lázničková-Galetová, Martina; Leduc, Charlotte; Nikolskiy, Pavel; Nussbaumer, Marc; O’Drisceoil, Cóilín; Orlando, Ludovic; Outram, Alan; Pavlova, Elena Y.; Perri, Angela R.; Pilot, Małgorzata; Pitulko, Vladimir V.; Plotnikov, Valerii V.; Protopopov, Albert V.; Rehazek, André; Sablin, Mikhail; Seguin-Orlando, Andaine; Storå, Jan; Verjux, Christian; Zaibert, Victor F.; Zazula, Grant; Crombé, Philippe; Hansen, Anders J.; Willerslev, Eske; Leonard, Jennifer A.; Götherström, Anders; Pinhasi, Ron; Schuenemann, Verena J.; Hofreiter, Michael; Gilbert, Marcus Thomas Pius; Shapiro, Beth; Larson, Greger; Krause, Johannes; Dalén, Love; Skoglund, Pontus (Peer reviewed; Journal article, 2022)
      The grey wolf (Canis lupus) was the first species to give rise to a domestic population, and they remained widespread throughout the last Ice Age when many other large mammal species went extinct. Little is known, however, ...

    • Plant functional trait change across a warming tundra biome 

      Bjorkman, Anne D.; Myers-Smith, Isla H.; Elmendorf, Sarah C.; Normand, Signe; Rüger, Nadja; Beck, Pieter S. A.; Blach-Overgaard, Anne; Blok, Daan; Cornelissen, J. Hans C.; Forbes, Bruce C.; Georges, Damien; Goetz, Scott J.; Guay, Kevin C.; Henry, Gregory H.R.; HilleRisLambers, Janneke; Hollister, Robert D.; Karger, Dirk N.; Kattge, Jens; Manning, Peter; Prevéy, Janet S.; Rixen, Christian; Schaepman-Strub, Gabriela; Thomas, Haydn J.D.; Vellend, Mark; Wilmking, Martin; Wipf, Sonja; Carbognani, Michele; Hermanutz, Luise; Lévesque, Esther; Molau, Ulf; Petraglia, Alessandro; Soudzilovskaia, Nadejda A.; Spasojevic, Marko J.; Tomaselli, Marcello; Vowles, Tage; Alatalo, Juha M.; Alexander, Heather D.; Anadon-Rosell, Alba; Angers-Blondin, Sandra; te Beest, Mariska; Berner, Logan; Björk, Robert G.; Buchwal, Agata; Buras, Allan; Christie, Katherine; Cooper, Elisabeth J.; Dullinger, Stefan; Elberling, Bo; Eskelinen, Anu; Frei, Esther R.; Grau, Oriol; Grogan, Paul; Hallinger, Martin; Semenschuk, Philipp; Speed, James David Mervyn; Hofgaard, Annika (Journal article; Peer reviewed, 2018)
      The tundra is warming more rapidly than any other biome on Earth, and the potential ramifications are far-reaching because of global feedback effects between vegetation and climate. A better understanding of how environmental ...

    • Population genomics of the Viking world 

      Margaryan, Ashot; Lawson, Daniel J.; Sikora, Martin; Racimo, Fernando; Rasmussen, Simon; Moltke, Ida; Cassidy, Lara M.; Jørsboe, Emil; Ingason, Andres; Pedersen, Mikkel Winther; Korneliussen, Thorfinn; Wilhelmson, Helene; Bus, Magdalena M.; de Barros Damgaard, Peter; Martiniano, Rui; Renaud, Gabriel; Bhérer, Claude; Moreno-Mayar, J. Víctor; Fotakis, Anna K.; Allen, Marie; Allmäe, Raili; Molak, Martyna; Cappellini, Enrico; Scorrano, Gabriele; McColl, Hugh; Buzhilova, Alexandra; Fox, Allison; Albrechtsen, Anders; Schütz, Berit; Skar, Birgitte; Arcini, Caroline; Falys, Ceri; Jonson, Charlotte Hedenstierna; Błaszczyk, Dariusz; Pezhemsky, Denis; Turner-Walker, Gordon; Gestsdóttir, Hildur; Lundstrøm, Inge; Gustin, Ingrid; Mainland, Ingrid; Potekhina, Inna; Muntoni, Italo M.; Cheng, Jade Y.; Stenderup, Jesper; Ma, Jilong; Gibson, Julie; Peets, Jüri; Gustafsson, Jörgen; Iversen, Katrine Højholt; Simpson, Linzi; Strand, Lisa Mariann; Loe, Louise; Sikora, Maeve; Florek, Marek; Vretemark, Maria; Redknap, Mark; Bajka, Monika; Pushkina, Tamara; Søvsø, Morten; Grigoreva, Natalia; Christensen, Tom; Kastholm, Ole; Uldum, Otto; Favia, Pasquale; Holck, Per; Sten, Sabine; Arge, Símun V; Ellingvåg, Sturla; Moiseyev, Vayacheslav; Bogdanowicz, Wiesław; Magnusson, Yvonne; Orlando, Ludovic; Pentz, Peter; Jessen, Mads Dengsø; Pedersen, Anne; Collard, Mark; Bradley, Daniel G.; Jørkov, Marie Louise; Arneborg, Jette; Lynnerup, Niels; Price, Neil; Gilbert, Marcus Thomas Pius; Allentoft, Morten E.; Bill, Jan; Sindbæk, Søren M; Hedeager, Lotte; Kristiansen, Kristian; Nielsen, Rasmus; Werge, Thomas; Willerslev, Eske (Peer reviewed; Journal article, 2020)
      The maritime expansion of Scandinavian populations during the Viking Age (about ad 750–1050) was a far-flung transformation in world history1,2. Here we sequenced the genomes of 442 humans from archaeological sites across ...

    • Towards complete and error-free genome assemblies of all vertebrate species 

      Rhie, Arang; McCarthy, Shane A.; Fedrigo, Olivier; Damas, Joana; Formenti, Giulio; Koren, Sergey; Uiano-Silva, Marcela; Chow, William; Fungtammasan, Arkarachai; Kim, Juwan; Lee, Chul; Ko, Byung June; Chaisson, Mark; Gedman, Gregory L.; Cantin, Lindsey J.; Thibaud-Nissen, Francoise; Haggerty, Leanne; Bista, Iliana; Smith, Michelle; Haase, Bettina; Mountcastle, Jacquelyn; Winkler, Sylke; Paez, Sadye; Howard, Jason; Vernes, Sonja C.; Lama, Tanya M.; Grutzner, Frank; Warren, Wesley C.; Balakrishnan, Christopher N.; Burt, Dave; George, Julia M.; Biegler, Matthew T.; Iorns, David; Digby, Andrew; Eason, Daryl; Robertson, Bruce; Edwards, Taylor; Wilkinson, Mark; Turner, George; Meyer, Axel; Kautt, Andreas F.; Franchini, Paolo; Detrich, H. William III; Svardal, Hannes; Wagner, Maximillian; Naylor, Gavin J.P.; Pippel, Martin; Malinsky, Milan; Gilbert, Marcus Thomas Pius; Jarvis, Erich D. (Peer reviewed; Journal article, 2021)
      High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial ...