• Inferring the heritability of bacterial traits in the era of machine learning 

      Mai, The Tien; Lees, John A; Gladstone, Rebecca Ashley; Corander, Jukka (Peer reviewed; Journal article, 2023)
      Quantification of heritability is a fundamental desideratum in genetics, which allows an assessment of the contribution of additive genetic variation to the variability of a trait of interest. The traditional computational ...
    • Shuffle & untangle: novel untangle methods for solving the tanglegram layout problem 

      Nguyen, van Nghia; Chawshin, Kurdistan; Berg, Carl Fredrik; Varagnolo, Damiano (Peer reviewed; Journal article, 2022)
      Motivation A tanglegram is a plot of two-tree-like diagrams, one facing the other, and having their labels connected by inter-tree edges. These two trees, which could be both phylogenetic trees and dendrograms stemming ...