Browsing NTNU Open by Author "Frigessi, Arnoldo"
Now showing items 1-5 of 5
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Discovery of host-directed modulators of virus infection by probing the SARS-CoV-2–host protein–protein interaction network
Vandana, Vandana; Aittokallio, Tero Antero; Frigessi, Arnoldo; Athanasiadis, Paschalis; Wagoner, Jessica; Hartigh, Andreas B Den; Sidorova, Julia; Ianevski, Aleksandr; Fink, Susan L.; White, Judith M.; Polyak, Stephen J. (Peer reviewed; Journal article, 2022)The ongoing coronavirus disease 2019 (COVID-19) pandemic has highlighted the need to better understand virus–host interactions. We developed a network-based method that expands the severe acute respiratory syndrome ... -
Integrative clustering reveals a novel split in the luminal A subtype of breast cancer with impact on outcome
Aure, Miriam Ragle; Vitelli, Valeria; Jernström, Sandra Johanna; Kumar, Surendra; Krohn, Marit; Due, Eldri Undlien; Haukaas, Tonje Husby; Leivonen, Suvi-Katri; Vollan, Hans Kristian Moen; Luders, Torben; Rødland, Einar Andreas; Vaske, Charles; Zhao, Wei; Møller, Elen Kristine; Nord, Silje; Giskeødegård, Guro F.; Bathen, Tone Frost; Caldas, Carlos; Tramm, Trine; Alsner, Jan; Overgaard, Jens; Geisler, Jürgen; Bukholm, Ida Rashida Khan; Naume, Bjørn; Schlichting, Ellen; Sauer, Torill; Mills, Gordon B.; Kåresen, Rolf; Mælandsmo, Gunhild; Lingjærde, Ole Christian; Frigessi, Arnoldo; Kristensen, Vessela N.; Børresen-Dale, Anne-Lise; Sahlberg, Kristine Kleivi; OSBREAC, Oslo Breast Cancer Consortium (Journal article; Peer reviewed, 2017)Background Breast cancer is a heterogeneous disease at the clinical and molecular level. In this study we integrate classifications extracted from five different molecular levels in order to identify integrated ... -
Pre-diagnostic DNA methylation in blood leucocytes in cutaneous melanoma; a nested case–control study within the Norwegian Women and Cancer cohort
Page, Christian Magnus; Nøst, Therese Haugdahl; Djordjilović, Vera; Thoresen, Magne; Frigessi, Arnoldo; Sandanger, Torkjel M; Veierød, Marit Bragelien (Journal article; Peer reviewed, 2022) -
Scalable Breast Cancer Simulations - A Stochastic, Hybrid Cellular Automaton Model for Precision Medicine
Taskén, Håkon Austlid (Master thesis, 2023)Matematisk modellering og simulering er en lovende tilnærming til persontilpasset kreftmedisin. Å sette sammen diskrete celle-baserte modeller med kontinuerlige modeller til en hybrid, cellulær automata (CA) er en kraftfull ... -
The Genomic HyperBrowser: an analysis web server for genome-scale data
Sandve, Geir Kjetil; Gundersen, Sveinung; Johansen, Morten; Glad, Ingrid Kristine; Gunathasan, Krishanthi; Holden, Lars; Holden, Marit; Liestøl, Knut; Nygård, Ståle; Nygaard, Vegard; Paulsen, Jonas; Rydbeck, Halfdan; Trengereid, Kai; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Kalaš, Matúš; Lien, Tonje Gulbrandsen; Rye, Morten Beck; Frigessi, Arnoldo; Hovig, Johannes Eivind (Journal article; Peer reviewed, 2013)The immense increase in availability of genomic scale datasets, such as those provided by the ENCODE and Roadmap Epigenomics projects, presents unprecedented opportunities for individual researchers to pose novel falsifiable ...