• CImbinator: a web-based tool for drug synergy analysis in small- and large-scale datasets 

      Flobak, Åsmund; Vázquez, Miguel; Lægreid, Astrid; Valencia, Alfonso (Journal article; Peer reviewed, 2017)
      Motivation: Drug synergies are sought to identify combinations of drugs particularly beneficial. User-friendly software solutions that can assist analysis of large-scale datasets are required. Results: CImbinator is a ...
    • Patient dossier: Healthcare queries over distributed resources 

      Vazquez Garcia, Miguel; Valencia, Alfonso (Journal article; Peer reviewed, 2019)
      As with many other aspects of the modern world, in healthcare, the explosion of data and resources opens new opportunities for the development of added-value services. Still, a number of specific conditions on this domain ...
    • A user guide for the online exploration and visualization of PCAWG data 

      Goldman, Mary J.; Zhang, Junjun; Fonseca, Nuno A.; Cortés-Ciriano, Isidro; Xiang, Qian; Craft, Brian; Piñeiro-Yáñez, Elena; O’Connor, Brian D.; Bazant, Wojciech; Barrera, Elisabet; Muñoz-Pomer, Alfonso; Petryszak, Robert; Füllgrabe, Anja; Al-Shahrour, Fatima; Keays, Maria; Haussler, David; Weinstein, John N.; Huber, Wolfgang; Valencia, Alfonso; Park, Peter J.; Papatheodorou, Irene; Zhu, Jingchun; Ferretti, Vincent; Vazquez Garcia, Miguel (Peer reviewed; Journal article, 2020)
      The Pan-Cancer Analysis of Whole Genomes (PCAWG) project generated a vast amount of whole-genome cancer sequencing resource data. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, which ...