Blar i NTNU Open på tidsskrift "G3: Genes, Genomes, Genetics"

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    • Animal Models and Integrated Nested Laplace Approximations 

      Holand, Anna Marie; Steinsland, Ingelin; Martino, Sara; Jensen, Henrik (Journal article; Peer reviewed, 2013)
      Animal models are generalized linear mixed models used in evolutionary biology and animal breeding to identify the genetic part of traits. Integrated Nested Laplace Approximation (INLA) is a methodology for making fast, ...

    • The genetic architecture of dog ownership: large-scale genome-wide association study in 97,552 European-ancestry individuals 

      Gong, Tong; Karlsson, Robert; Yao, Shuyang; Magnusson, Patrik K.E.; Ajnakina, Olesya; Steptoe, Andrew; Bhatta, Laxmi; Brumpton, Ben Michael; Kumar, Ashish; Mélen, Erik; Lin, Keng-Han; Tian, Chao; Fall, Tove; Almqvist, Catarina; Aslibekyan, Stella; Auton, Adam; Babalola, Elizabeth; Bell, Robert K.; Bielenberg, Jessica; Bryc, Katarzyna; Bullis, Emily; Coker, Daniella; Partida, Gabriel Cuellar; Dhamija, Devika; Das, Sayantan; Elson, Sarah L.; Eriksson, Nicholas; Filshtein, Teresa; Fitch, Alison; Fletez-Brant, Kipper; Fontanillas, Pierre; Freyman, Will; Granka, Julie M.; Heilbron, Karl; Hernandez, Alejandro; Hicks, Barry; Hinds, David; Jewett, Ethan M.; Jiang, Yunxuan; Kukar, Katelyn; Kwong, Alan; Llamas, Bianca A.; Lowe, Maya; McCreight, Jey C.; McIntyre, Matthew H.; Micheletti, Steven J.; Moreno, Meghan E.; Nandakumar, Priyanka; Nguyen, Dominique T.; Noblin, Elizabeth S.; O’Connell, Jared; Petrakovitz, Aaron A.; Poznik, G. David; Reynoso, Alexandra; Schumacher, Morgan; Shastri, Anjali J.; Shelton, Janie F.; Shi, Jingchunzi; Shringarpure, Suyash; Su, Qiaojuan Jane; Tat, Susana A.; Tchakouté, Christophe Toukam; Tran, Vinh; Tung, Joyce Y.; Wang, Xin; Wang, Wei; Weldon, Catherine H.; Wilton, Peter; Wong, Corinna D. (Peer reviewed; Journal article, 2024)
      Dog ownership has been associated with several complex traits, and there is evidence of genetic influence. We performed a genome-wide association study of dog ownership through a meta-analysis of 31,566 Swedish twins in 5 ...

    • Genomic prediction including SNP-specific variance predictors 

      Mouresan, Elena Flavia; Selle, Maria; Rönnegård, Lars (Journal article; Peer reviewed, 2019)
      The increasing amount of available biological information on the markers can be used to inform the models applied for genomic selection to improve predictions. The objective of this study was to propose a general model for ...

    • Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia) 

      Holt, Carson; Campbell, Michael; Keays, David Anthony; Edelman, Nathaniel; Kapusta, Aurélie; Maclary, Emily; Domyan, Eric T.; Suh, Alexander; Warren, Wesley C.; Yandell, Mark; Gilbert, Marcus Thomas Pius; Shapiro, Michael D. (Journal article; Peer reviewed, 2018)
      The domestic rock pigeon (Columba livia) is among the most widely distributed and phenotypically diverse avian species. C. livia is broadly studied in ecology, genetics, physiology, behavior, and evolutionary biology, and ...

    • Scan-o-matic: High-Resolution Microbial Phenomics at a Massive Scale 

      Zackrisson, Martin; Hallin, Johan; Ottoson, Lars-Göran; Dahl, Peter; Fernandez-Parada, Esteban; Landström, Erik; Fernandez-Ricaud, Luciano; Kaferle, Petra; Skyman, Andreas; Stenberg, Simon; Omholt, Stig William; Petrovic, Uros; Warringer, Jonas; Blomberg, Anders (Journal article; Peer reviewed, 2016)
      The capacity to map traits over large cohorts of individuals-phenomics-lags far behind the explosive development in genomics. For microbes, the estimation of growth is the key phenotype because of its link to fitness. We ...