nemi
Interface ProteinCompare

public interface ProteinCompare
NeMi - Neighborhood Mining Distributed AS-IS - No Warranty $Id: ProteinCompare.java 72 2006-02-02 12:12:10Z sundsdal $
Method Detail

similarity

public double similarity(java.lang.String sourceId,
                         java.lang.String targetId)
Returns a value for the similarity two protein. A similarity score of 1.0 means they are equal (or max similarity), and 0.0 means total dissimilarity.
Parameters:
sourceId - - Protein identifier
targetId - - Protein identifier
Returns:
similarity between 0 and 1.